| Amygdala | HAP1 [Synonyms: HAP2, hHLP1, HIP5, HLP] | huntingtin-associated protein 1 |
| Amygdala | TAC1 [Synonyms: NK2, NKNA, TAC2, Hs.2563] | tachykinin 1 [Source:MarkerSymbol;Acc:MGI:98474] |
| Amygdala, Basolateral Complex | GRP [Synonyms: BN, proGRP, preproGRP, GRP-10] | gastrin releasing peptide |
| Amygdala, Basolateral Complex | NOV [Synonyms: IGFBP9, NOVH, CCN3] | nephroblastoma overexpressed gene |
| Amygdala, Basolateral Complex | NR2F2 [Synonyms: ARP1, COUPTFB, COUP-TFII, MGC117452, SVP40, TFCOUP2] | nuclear receptor subfamily 2, group F, member 2 |
| Amygdala, Central Nucleus | ATP6V1C2 [Synonyms: ATP6C2, VMA5] | vacuolar H+ ATPase C2 isoform b [Source: RefSeq_peptide NP_653184] |
| Barrington's Nucleus | CRH [Synonyms: CRF] | Corticoliberin precursor (Corticotropin-releasing factor) (CRF) (Corticotropin-releasing hormone). [Source:Uniprot/SWISSPROT;Acc:P06850] |
| Basal Nucleus of Meynert | GAL [Synonyms: GLNN, MGC40167, GALN] | galanin |
| Basal Nucleus of Meynert | NGFR [Synonyms: TNFRSF16, p75(NTR), CD271] | nerve growth factor receptor (TNFR superfamily, member 16) [Source:MarkerSymbol;Acc:MGI:97323] |
| Basal Nucleus of Meynert | TAC3 [Synonyms: NKNB, NKB, ZNEUROK1, PRO1155] | tachykinin 2 [Source:MarkerSymbol;Acc:MGI:98476] Neurokinin 2 |
| Blood Brain Barrier | CLDN5 [Synonyms: CPETRL1, TMVCF, BEC1, AWAL] | Claudin 5 |
| Blood Brain Barrier | HSPA12B [Synonyms: MGC131912, dJ1009E24.2, C20orf60, FLJ32150] | Heat shock 70kD protein 12B |
| Blood Brain Barrier | SLC7A5 [Synonyms: MPE16, LAT1, 4F2LC, E16, D16S469E, hLAT1, CD98] | Solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 |
| Brainstem (Pons and Medulla) | GLRA1 [Synonyms: STHE, MGC138878, MGC138879] | Glycine receptor alpha-1 chain precursor (Glycine receptor 48 kDa subunit) (Strychnine-binding subunit). [Source:Uniprot/SWISSPROT;Acc:P23415] |
| Brainstem (Pons and Medulla) | POGZ [Synonyms: ZNF635, KIAA0461, SUHW5, MGC71543] | Pogo transposable element with ZNF domain. [Source:Uniprot/SWISSPROT;Acc:Q7Z3K3] |
| Brainstem (Pons and Medulla) | SLC6A5 [Synonyms: NET1, GLYT2] | solute carrier family 6 (neurotransmitter transporter, glycine), member 5 [Source:MarkerSymbol;Acc:MGI:105090] |
| Cerebellum, Granule Cells | GABRA6 [Synonyms: MGC116904, MGC116903] | gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6 |
| Cerebellum, Purkinje Cell Layer | HBEGF [Synonyms: HEGFL, DTSF, DTR, DTS] | heparin-binding EGF-like growth factor |
| Cerebellum, Purkinje Cell Layer | ICMT [Synonyms: HSTE14, MSTP098, PPMT, PCCMT, MST098, PCMT, MGC39955] | isoprenylcysteine carboxyl methyltransferase |
| Cerebellum, Purkinje Cell Layer | PCP2 [Synonyms: MGC41903, L7, DKFZp686M0187, FLJ27345, GPSM4] | Purkinje cell protein 2 (L7) |
| Cortex | C8orf46 [Synonyms: MGC33510, MGC33510] | RIKEN cDNA 3110035E14 gene (3110035E14Rik), mRNA [Source:RefSeq_dna;Acc:NM_178399] |
| Cortex | CCL27 [Synonyms: ALP, CTACK, CTAK, ESkine, ILC, PESKY, SCYA27, skinkine, ALP, PESKY, ESKINE, CTACK, SCYA27, CTAK, ILC] | Small inducible cytokine A27 precursor (CCL27) (CC chemokine ILC) (IL- 11 R-alpha-locus chemokine) (Skinkine) (ESkine) (Cuteaneous T-cell- attracting chemokine) (CTACK). [Source:Uniprot/SWISSPROT;Acc:Q9Y4X3] |
| Cortex | STX1A [Synonyms: p35-1, HPC-1, STX1] | syntaxin 1A (brain) |
| Cortex | TBR1 [Synonyms: TES-56, MGC141978] | T-box brain gene 1 |
| Cortex, Anterior Cingulate | CCKBR [Synonyms: GASR, CCK-B] | Gastrin/cholecystokinin type B receptor (CCK-B receptor) (CCK-BR) (Cholecystokinin-2 receptor) (CCK2-R). [Source:Uniprot/SWISSPROT;Acc:P32239] |
| Cortex, Insula | FEZF2 [Synonyms: FLJ10142, ZNF312, TOF, Zfp312, Fez, FEZL, FKSG36] | zinc finger protein 312 [Source:MarkerSymbol;Acc:MGI:1859823] |
| Cortex, Somatosensory | CARTPT [Synonyms: CART] | Cocaine- and amphetamine-regulated transcript protein precursor [Contains: CART(1-39); CART(42-89)]. [Source:Uniprot/SWISSPROT;Acc:Q16568] |
| Gabaergic Neurons | GPR88 [Synonyms: STRG] | G-protein coupled receptor 88 |
| Gabaergic Neurons | VIP [Synonyms: MGC13587, PHM27] | vasoactive intestinal polypeptide |
| Hippocampus | HTR1A [Synonyms: ADRBRL1, ADRB2RL1, 5-HT1A] | 5-hydroxytryptamine 1A receptor (5-HT-1A) (Serotonin receptor 1A) (5- HT1A) (G-21). [Source:Uniprot/SWISSPROT;Acc:P08908] |
| Hippocampus | THY1 [Synonyms: FLJ33325, CD90] | Thy-1 membrane glycoprotein precursor (Thy-1 antigen) (CDw90) (CD90 antigen). [Source:Uniprot/SWISSPROT;Acc:P04216] |
| Hippocampus, Ammon's Horn | FIBCD1 [Synonyms: FLJ14810] | fibrinogen C domain containing 1 |
| Hippocampus, Ammon's Horn | NEUROD6 [Synonyms: Atoh2, Math-2, NEX1M] | neurogenic differentiation 6 |
| Hippocampus, Ammon's Horn | PKP2 [Synonyms: ARVD9] | plakophilin 2 |
| Hippocampus, Dentate Gyrus | CRLF1 [Synonyms: CLF, NR6, CLF-1, CISS, CISS1] | cytokine receptor-like factor 1 |
| Hippocampus, Dentate Gyrus | LCT [Synonyms: LAC, LPH, LPH1] | Lactase-phlorizin hydrolase precursor (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]. [Source:Uniprot/SWISSPROT;Acc:P09848] |
| Hippocampus, Dentate Gyrus | RLBP1L2 [Synonyms: C6ORF213] | retinaldehyde binding protein 1-like 2 |
| Hypothalamus | GPX3 | glutathione peroxidase 3 |
| Hypothalamus | HCRT [Synonyms: OX, PPOX] | hypocretin |
| Hypothalamus | TRH [Synonyms: MGC125965, MGC125964] | thyrotropin releasing hormone |
| Hypothalamus, Paraventricular Nucleus | AVP [Synonyms: VP, AVP-NPII, ADH, ARVP, AVRP] | arginine vasopressin [Source:MarkerSymbol;Acc:MGI:88121] |
| Hypothalamus, Paraventricular Nucleus | OXT [Synonyms: OT, MGC126892, OT-NPI, OT, MGC126890] | Oxytocin-neurophysin 1 precursor (OT-NPI) [Contains: Oxytocin (Ocytocin); Neurophysin 1]. [Source:Uniprot/SWISSPROT;Acc:P01178] |
| Locus Coeruleus | DBH [Synonyms: DBM] | dopamine beta hydroxylase [Source:MarkerSymbol;Acc:MGI:94864] |
| Locus Coeruleus | MAOA | Amine oxidase [flavin-containing] A (EC 1.4.3.4) (Monoamine oxidase type A) (MAO-A). [Source:Uniprot/SWISSPROT;Acc:P21397] |
| Locus Coeruleus | SLC6A2 [Synonyms: NET, NET1, SLC6A5, NAT1] | "solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2" |
| Neurogenic | DCX [Synonyms: DC, DBCN, LISX, SCLH, XLIS] | doublecortin |
| Neurogenic | MKI67 [Synonyms: Ki-67, KIA] | Antigen KI-67. [Source:Uniprot/SWISSPROT;Acc:P46013] |
| Neurogenic | NR2E1 [Synonyms: TLX, XTLL, TLL] | Orphan nuclear receptor NR2E1 (Nuclear receptor TLX) (Tailless homolog) (Tll) (hTll). [Source:Uniprot/SWISSPROT;Acc:Q9Y466] |
| Neurogenic | VIM [Synonyms: FLJ36605] | vimentin |
| Raphe Nuclei | FEV [Synonyms: PET-1, HSRNAFEV] | FEV (ETS oncogene family) |
| Raphe Nuclei | GCHFR [Synonyms: MGC138469, HsT16933, MGC138467, P35, GFRP] | GTP cyclohydrolase I feedback regulator |
| Raphe Nuclei | SLC6A4 [Synonyms: hSERT, SERT, 5-HTT, HTT, 5HTT, OCD1] | solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 |
| Striatum | ADORA2A [Synonyms: ADORA2, RDC8, hA2aR] | Adenosine A2a receptor. [Source:Uniprot/SWISSPROT;Acc:P29274] |
| Striatum | DRD1 [Synonyms: DADR, DRD1A] | dopamine receptor D1 (mouse dopamine receptor D1A) |
| Substantia Nigra | DDC [Synonyms: AADC] | dopa decarboxylase [Source:MarkerSymbol;Acc:MGI:94876] |
| Substantia Nigra | NTSR1 [Synonyms: NTR] | neurotensin receptor 1 [Source:MarkerSymbol;Acc:MGI:97386] |
| Substantia Nigra | PITX3 [Synonyms: PTX3, MGC12766] | Pituitary homeobox 3 (Homeobox protein PITX3). [Source:Uniprot/SWISSPROT;Acc:O75364] |
| Substantia Nigra | SLC6A3 [Synonyms: DAT1, DAT] | solute carrier family 6 (neurotransmitter transporter, dopamine), member 3 |
| Subthalamic Nucleus | PITX2 [Synonyms: Brx1, IDG2, IRID2, ARP1, IGDS, RIEG, Otlx2, MGC20144, MGC111022, RIEG1, RS, IHG2, IGDS2, PTX2, RGS] | Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1). [Source:Uniprot/SWISSPROT;Acc:Q99697] |
| Thalamus | AMOTL1 [Synonyms: JEAP] | Angiomotin-like protein 1. [Source:Uniprot/SWISSPROT;Acc:Q8IY63] |
| Thalamus | RAMP3 | receptor (calcitonin) activity modifying protein 3 |
| Thalamus | RGS16 [Synonyms: A28-RGS14P, RGS-R, A28-RGS14] | regulator of G-protein signaling 16 |
| Thalamus | SLITRK6 [Synonyms: MGC119595, MGC119597, MGC119596] | SLIT and NTRK-like protein 6 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H5Y7] |
| Thalamus | TNNT1 [Synonyms: ANM, MGC104241] | Troponin T, slow skeletal muscle (TnTs) (Slow skeletal muscle troponin T) (sTnT). [Source:Uniprot/SWISSPROT;Acc:P13805] |
| White Matter - Glia, Astrocytes | GFAP [Synonyms: FLJ45472] | Glial fibrillary acidic protein, astrocyte (GFAP) [Source: Uniprot/SWISSPROT P14136] |
| White Matter - Glia, Astrocytes | S100B [Synonyms: S100beta, S100, NEF] | "S100 protein, beta polypeptide, neural" |
| White Matter - Glia, Microglia [activated] | CD68 [Synonyms: SCARD1, DKFZp686M18236, GP110] | Macrosialin precursor (GP110) (CD68 antigen). [Source:Uniprot/SWISSPROT;Acc:P34810] |
| White Matter - Glia, Microglia [constitutive] | CX3CR1 [Synonyms: CCRL1, GPR13, CMKBRL1, V28, GPRV28, CMKDR1] | CX3C chemokine receptor 1 (C-X3-C CKR-1) (CX3CR1) (Fractalkine receptor) (G-protein coupled receptor 13) (V28) (Beta chemokine receptor-like 1) (CMK-BRL-1) (CMKBLR1). [Source:Uniprot/SWISSPROT;Acc:P49238] |
| White Matter - Glia, Oligodendroglia | OLIG1 [Synonyms: BHLHB6] | oligodendrocyte transcription factor 1 |
| White Matter - Glia, Oligodendroglia | UGT8 [Synonyms: CGT] | UDP galactosyltransferase 8A |